MetNet XML Builder for Cytoscape

Select the pathways to be built, press "Build", and select a destination folder.
The built pathways can be loaded into Cytoscape by selecting File->Import->Network...

To use the MetNet Visual Style, save it to your computer, then in Cytoscape, choose File->Import->Vizmap Property File... Then select "FCMStyle" from the drop-down menu on the right side of the Cytoscape toolbar.

For more information, please visit the Help page.

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If you use the network data in your publication, please cite
Wurtele ES, Ling Li, Dan Berleant, Dianne Cook, Julie A. Dickerson, Jing Ding, Heike Hofmann, Michael Lawrence, Eun-kyung Lee, Jie Li, Wieslawa Mentzen, Leslie Miller, Basil J. Nikolau, Nick Ransom, Yingjun Wang, 2007. MetNet: Systems Biology Software for Arabidopsis. In: Concepts in Plant Metabolomics. Springer Verlag ISBN: 978-1-4020-5607-9

This applet uses code from JDOM and L2FProd.