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Panax quinquefolius Species Overview

Experiment: MedPlntConsort (Medicinal Plant Consortium - metabolomic and transcriptomic data from selected plant materials)

Co-analysis of metabolomics and transcriptomics data is available. To identify the transcripts whose levels are most closely correlated with a metabolite, click on that metabolite. In the window that opens, click on [Go to omics analysis]

Sample Name ReplicatesDescription
Flower2
Leaf-mature4
Plant (1 year)4
Root-mature4
Seedling-Sterile2

1 Platforms

Platform: Panax LC/TOF MS Positive Ion

+ LC-TOF metadata
+ MarkerLynx metadata
+ QuanLynx metadata



+ Biological metadata
Metabolite Search

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Chemically defined metabolites in this experiment:

Ginsenoside Rb1
        BG-Pan-HPLC-E-POS-F1-1109.631-10.61  [M+H]+
Ginsenoside Rb1
        BG-Pan-HPLC-E-POS-F1-1126.654-10.61  [M+NH4]+
Ginsenoside Rb1
        BG-Pan-HPLC-E-POS-F1-1131.614-10.56  [M+Na]+
Ginsenoside Rb3
        BG-Pan-HPLC-E-POS-F1-1079.622-11.17  [M+H]+
Ginsenoside Rb3
        BG-Pan-HPLC-E-POS-F1-1096.649-11.22  [M+NH4]+
Ginsenoside Rc
        BG-Pan-HPLC-E-POS-F1-1079.619-10.85  [M+H]+
Ginsenoside Rc
        BG-Pan-HPLC-E-POS-F1-1096.645-10.86  [M+NH4]+
Ginsenoside Rc
        BG-Pan-HPLC-E-POS-F1-1101.597-10.86  [M+Na]+
Ginsenoside Rd
        BG-Pan-HPLC-E-POS-F1-947.578-11.7  [M+H]+
Ginsenoside Rd
        BG-Pan-HPLC-E-POS-F1-964.604-11.7  [M+NH4]+
Ginsenoside Re
        BG-Pan-HPLC-E-POS-F1-423.358-7.99  fragment
Ginsenoside Re
        BG-Pan-HPLC-E-POS-F1-947.573-7.99  [M+H]+
Ginsenoside Re
        BG-Pan-HPLC-E-POS-F1-964.588-8.06  [M+NH4]+
Ginsenoside Re
        BG-Pan-HPLC-E-POS-F1-969.558-8.01  [M+Na]+
Ginsenoside Rg1
        BG-Pan-HPLC-E-POS-F1-801.509-8.06  [M+H]+
Ginsenoside Rg1
        BG-Pan-HPLC-E-POS-F1-823.488-8.04  [M+Na]+
Ginsenoside Rg2
        BG-Pan-HPLC-E-POS-F1-749.493-10.41  [M+H-2H2O]+
Ginsenoside Rg2
        BG-Pan-HPLC-E-POS-F1-767.505-10.44  [M+H-H2O]+
Ginsenoside Rg4
        BG-Pan-HPLC-E-POS-F1-767.507-7.98  [M+H]+
Ginsenoside Rh1
        BG-Pan-HPLC-E-POS-F1-1277.908-10.49  [2M+H]+
Ginsenoside Rh1
        BG-Pan-HPLC-E-POS-F1-603.433-10.49  [M+H-2H2O]+
Ginsenoside Rh1
        BG-Pan-HPLC-E-POS-F1-621.442-10.5  [M+H-H2O]+
Ginsenoside Rh2
        BG-Pan-HPLC-E-POS-F1-587.439-16.65  [M+H-2H2O]+
Ginsenoside Ro
        BG-Pan-HPLC-E-POS-F1-974.519-10.8  [M+NH4]+
Panasenoside
        BG-Pan-HPLC-E-POS-F1-611.166-5.11  [M+H]+
Protopanaxadiol
        BG-Pan-HPLC-E-POS-F1-407.369-20.1  [M+H-3H2O]+
Protopanaxadiol
        BG-Pan-HPLC-E-POS-F1-425.381-20.08  [M+H-2H2O]+
Protopanaxadiol
        BG-Pan-HPLC-E-POS-F1-443.388-20.09  [M+H-H2O]+
Protopanaxadiol
        BG-Pan-HPLC-E-POS-F1-921.799-20.09  [2M+H]+
Pseudoginsenoside F11: (Isomer III)
        BG-Pan-HPLC-E-POS-F1-801.48-10  [M+H]+
Pseudoginsenoside F11: Isomer I
        BG-Pan-HPLC-E-POS-F1-801.485-8.43  [M+H]+
Pseudoginsenoside F11: Isomer I
        BG-Pan-HPLC-E-POS-F1-823.485-8.45  [M+Na]+
Pseudoginsenoside F11: Isomer III
        BG-Pan-HPLC-E-POS-F1-823.496-10.05  [M+Na]+
Pseudoginsenoside F11: Isomer II
        BG-Pan-HPLC-E-POS-F1-801.5-9.04  [M+H]+
Pseudoginsenoside RT5
        BG-Pan-HPLC-E-POS-F1-655.437-10.08  [M+H]+
Quinquenoside L9
        BG-Pan-HPLC-E-POS-F1-801.484-6.64  [M+H-H2O]+
Quinquenoside L9
        BG-Pan-HPLC-E-POS-F1-819.492-6.63  [M+H]+
sucrose
        BG-Pan-HPLC-E-POS-F1-365.117-0.44  [M+Na]+
sucrose
        BG-Pan-HPLC-E-POS-F1-381.083-0.43  [M+K]+
Telmisartan - internal standard
        BG-Pan-HPLC-E-POS-F1-1029.492-10.98  [2M+H]+
Telmisartan - internal standard
        BG-Pan-HPLC-E-POS-F1-515.244-10.93  [M+H]+
Yesanchinoside R2
        BG-Pan-HPLC-E-POS-F1-787.472-9.85  [M+H]+

Volcano Plot?

Sample 1:

Sample 2: