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Rauvolfia serpentina Species Overview

Experiment: MedPlntConsort (Medicinal Plant Consortium - metabolomic and transcriptomic data from selected plant materials)

Co-analysis of metabolomics and transcriptomics data is available. To identify the transcripts whose levels are most closely correlated with a metabolite, click on that metabolite. In the window that opens, click on [Go to omics analysis]

Sample Name ReplicatesDescription
Flower - Anthers, Buds, Immature (25-75%)3
Leaf - Bud; Immature (25-75%); Young leaf (<25% Expanded)3
Leaf - Mature (Fully Expanded)3
Root - Elongating zone (Young); lateral roots3
Root - Mature zone; primary tap3
Stem - Primary9

1 Platforms

Platform: Rauvolfia LC/TOF MS Positive Ion

+ LC-TOF metadata
+ MarkerLynx metadata
+ QuanLynx metadata



+ Biological metadata
Metabolite Search

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Chemically defined metabolites in this experiment:

12-Hydroxyajmaline
        MDC-Rau-HPLC-E-POS-F1-343.193-6.47  [M+H]+
12-Hydroxyajmaline
        MDC-Rau-HPLC-E-POS-F1-685.4-6.44  [2M+H]+
12-Methoxyvellosimine
        MDC-Rau-HPLC-E-POS-F1-323.172-9.51  [M+H]+
17-O-Acetylajmaline
        MDC-Rau-HPLC-E-POS-F1-369.211-11.52  [M+H]+
18-Hydroxyepialloyohimbine
        MDC-Rau-HPLC-E-POS-F1-371.195-7.62  [M+H]+
Ajmalan-17-one,19,20-didehydro-12-methoxy-
        MDC-Rau-HPLC-E-POS-F1-337.189-9.18  [M+H]+
Ajmalicine
        MDC-Rau-HPLC-E-POS-F1-353.179-9.46  [M+H]+
Ajmaline
        MDC-Rau-HPLC-E-POS-F1-327.203-7.16  [M+H]+
Ajmaline
        MDC-Rau-HPLC-E-POS-F1-327.206-7.69  [M+H]+
Ajmaline
        MDC-Rau-HPLC-E-POS-F1-653.403-7.19  [2M+H]+
arginine
        MDC-Rau-HPLC-E-POS-F1-175.122-0.44  [M+H]+
Carapanaubine
        MDC-Rau-HPLC-E-POS-F1-429.206-6.99  [M+H]+
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-163.039-3.81  fragment
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-163.04-3.35  fragment
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-355.098-3.79  [M+H]+
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-355.104-3.38  [M+H]+
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-377.083-3.33  [M+Na]+
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-377.085-3.83  [M+Na]+
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-393.062-3.33  [M+K]+
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-393.063-3.79  [M+K]+
Chlorogenic acid
        MDC-Rau-HPLC-E-POS-F1-731.185-3.77  [2M+Na]+
Dehydrorescinnamine
        MDC-Rau-HPLC-E-POS-F1-633.284-14.65  [M+H]+
Dehydroreserpine
        MDC-Rau-HPLC-E-POS-F1-607.27-14.18  [M+H]+
Deserpidine
        MDC-Rau-HPLC-E-POS-F1-1179.513-14.46  [2M+Na]+
Deserpidine
        MDC-Rau-HPLC-E-POS-F1-579.26-14.41  [M+H]+
Kaempferol hexoside
        MDC-Rau-HPLC-E-POS-F1-449.11-9.56  [M+H]+
Kaempferol hexoside dirhamnoside
        MDC-Rau-HPLC-E-POS-F1-741.232-10.02  [M+H]+
Kaempferol hexoside dirhamnoside isomer 1
        MDC-Rau-HPLC-E-POS-F1-741.133-9.41  [M+H]+
Kaempferol hexoside dirhamnoside isomer 2
        MDC-Rau-HPLC-E-POS-F1-287.056-9.59  fragment
Kaempferol hexoside dirhamnoside isomer 2
        MDC-Rau-HPLC-E-POS-F1-741.201-9.49  [M+H]+
Kaempferol hexoside trirhamnoside
        MDC-Rau-HPLC-E-POS-F1-433.111-7.79  fragment
Kaempferol hexoside trirhamnoside
        MDC-Rau-HPLC-E-POS-F1-595.164-7.79  fragment
Kaempferol hexoside trirhamnoside
        MDC-Rau-HPLC-E-POS-F1-741.22-7.79  fragment
Kaempferol hexoside trirhamnoside
        MDC-Rau-HPLC-E-POS-F1-887.275-7.78  [M+H]+
Lochnerine
        MDC-Rau-HPLC-E-POS-F1-325.193-8.97  [M+H]+
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-179.07-4.66  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-179.072-4.24  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-197.081-4.66  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-197.085-4.28  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-215.092-4.68  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-215.094-4.32  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-359.133-4.22  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-359.137-4.64  fragment
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-377.145-4.69  [M+H]+
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-377.147-4.31  [M+H]+
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-394.167-4.67  [M+NH4]+
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-394.171-4.31  [M+NH4]+
Loganic acid
        MDC-Rau-HPLC-E-POS-F1-770.31-4.69  [2M+NH4]+
Loganin
        MDC-Rau-HPLC-E-POS-F1-179.065-6.92  fragment
Loganin
        MDC-Rau-HPLC-E-POS-F1-211.092-6.93  fragment
Loganin
        MDC-Rau-HPLC-E-POS-F1-229.108-6.93  fragment
Loganin
        MDC-Rau-HPLC-E-POS-F1-408.183-6.9  [M+NH4]+
Pseudoreserpine
        MDC-Rau-HPLC-E-POS-F1-595.266-12.24  [M+H]+
Raucaffricine
        MDC-Rau-HPLC-E-POS-F1-1047.421-8.65  [2M+Na]+
Raucaffricine
        MDC-Rau-HPLC-E-POS-F1-351.168-8.54  fragment
Raucaffricine
        MDC-Rau-HPLC-E-POS-F1-513.222-8.69  [M+H]+
Raunescine
        MDC-Rau-HPLC-E-POS-F1-1129.501-12.16  [2M+H]+
Raunescine
        MDC-Rau-HPLC-E-POS-F1-1151.49-12.17  [2M+Na]+
Raunescine
        MDC-Rau-HPLC-E-POS-F1-565.256-12.1  [M+H]+
Rescinnamine
        MDC-Rau-HPLC-E-POS-F1-1269.596-14.79  [2M+H]+
Rescinnamine
        MDC-Rau-HPLC-E-POS-F1-1291.58-14.84  [2M+Na]+
Rescinnamine
        MDC-Rau-HPLC-E-POS-F1-635.24-14.78  [M+H]+
Reserpiline
        MDC-Rau-HPLC-E-POS-F1-413.203-7.32  [M+H]+
Reserpine
        MDC-Rau-HPLC-E-POS-F1-609.241-14.39  [M+H]+
Sarpagine
        MDC-Rau-HPLC-E-POS-F1-311.177-4.04  [M+H]+
Secologanin
        MDC-Rau-HPLC-E-POS-F1-165.055-7.57  fragment
Secologanin
        MDC-Rau-HPLC-E-POS-F1-209.08-7.57  fragment
Secologanin
        MDC-Rau-HPLC-E-POS-F1-227.091-7.57  fragment
Secologanin
        MDC-Rau-HPLC-E-POS-F1-389.142-7.58  [M+H]+
Secologanin
        MDC-Rau-HPLC-E-POS-F1-411.125-7.57  [M+Na]+
Serpentine
        MDC-Rau-HPLC-E-POS-F1-349.152-10.74  [M+H]+
Serpentine
        MDC-Rau-HPLC-E-POS-F1-349.156-11.26  [M+H]+
Serpentine
        MDC-Rau-HPLC-E-POS-F1-697.302-10.73  [2M+H]+
Strictosidine
        MDC-Rau-HPLC-E-POS-F1-1061.464-10.11  [2M+H]+
Strictosidine
        MDC-Rau-HPLC-E-POS-F1-531.22-10.25  [M+H]+
Strictosidine
        MDC-Rau-HPLC-E-POS-F1-531.235-9.98  [M+H]+
sucrose
        MDC-Rau-HPLC-E-POS-F1-381.085-0.44  [M+K]+
Tetra phyllicine
        MDC-Rau-HPLC-E-POS-F1-309.196-4.73  [M+H]+
Tetrahydroalstonine
        MDC-Rau-HPLC-E-POS-F1-353.186-9.82  [M+H]+
Tryptamine
        MDC-Rau-HPLC-E-POS-F1-144.083-2.03  fragment
Vellosimine
        MDC-Rau-HPLC-E-POS-F1-293.16-6.16  [M+H]+
Vellosiminol
        MDC-Rau-HPLC-E-POS-F1-295.179-5.89  [M+H]+
Vomilenene
        MDC-Rau-HPLC-E-POS-F1-351.174-9.13  [M+H]+
Yohimbine
        MDC-Rau-HPLC-E-POS-F1-355.193-7.52  [M+H]+
Yohimbine isomer
        MDC-Rau-HPLC-E-POS-F1-355.178-8.52  [M+H]+
Yohimbine isomer
        MDC-Rau-HPLC-E-POS-F1-355.197-8.91  [M+H]+

Volcano Plot?

Sample 1:

Sample 2: