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Arabidopsis thaliana Species Overview

Experiment: Post-Synthetic Wall Modification ()

Co-analysis of metabolomics and transcriptomics data is available. To identify the transcripts whose levels are most closely correlated with a metabolite, click on that metabolite. In the window that opens, click on [Go to omics analysis]

Sample Name ReplicatesDescription
AnAXE4
AnFAE4
AnRAE4
WT Col-04
Empty vector4

1 Platforms

Platform: HPLC-ESI-QTOF-MS [OlgaLab]

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Metabolite Search

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Chemically defined metabolites in this experiment:

(E)-Sinapic acid
        Arabidopsis-HPLC-Pos-USA-224.068-18600
(S)-malate
        Arabidopsis-HPLC-Pos-USA-134.0213-21000
1,2-di-O-sinapoyl-beta-D-glucose
        Arabidopsis-HPLC-Pos-USA-592.1794-24500
1,2-dipalmitoyl-phosphatidylglycerol-phosphate
        Arabidopsis-HPLC-Pos-USA-802.4827-44600
1-18:2-2-18:2-monogalactosyldiacylglycerol
        Arabidopsis-HPLC-Pos-USA-1347.9059-6100
1-O-Sinapoyl-beta-D-glucose
        Arabidopsis-HPLC-Pos-USA-386.1216-6100
1-oleoyl-2-lyso-glycerone phosphate
        Arabidopsis-HPLC-Pos-USA-434.2424-42905.253737629
2-hydroxyferulate
        Arabidopsis-HPLC-Pos-USA-210.0523-11600
2-Phenylethylaldoxime
        Arabidopsis-HPLC-Pos-USA-195.0894-35193.4569132892
3-deaza-GMP
        Arabidopsis-HPLC-Pos-USA-362.0605-20681.4825102309
4-benzoyloxybutylglucosinolate
        Arabidopsis-HPLC-Pos-USA-495.0862-17352.3832198467
5-O-(indol-3-ylacetyl-myo-inositol) D-galactoside
        Arabidopsis-HPLC-Pos-USA-499.1698-22711.3412371134
7-Methylthioheptyl glucosinolate
        Arabidopsis-HPLC-Pos-USA-463.1001-21700
8-methylthiooctyl glucosinolate
        Arabidopsis-HPLC-Pos-USA-477.1169-23940.0039984006
8-oxo-GMP
        Arabidopsis-HPLC-Pos-USA-425.0569-20400
9(S)-hydroperoxy-10(E),12(Z),15(Z)-octadecatrienoic acid
        Arabidopsis-HPLC-Pos-USA-310.2142-35321.6303090044
all-trans-heptaprenyl diphosphate
        Arabidopsis-HPLC-Pos-USA-654.3815-37893.7956374122
Arabidopside A
        Arabidopsis-HPLC-Pos-USA-774.4544-42300
ascorbigen
        Arabidopsis-HPLC-Pos-USA-305.0899-15233.3633303336
benzoic acid _-D- glucose ester
        Arabidopsis-HPLC-Pos-USA-284.0894-5887.17391861747
caffeoylquinate
        Arabidopsis-HPLC-Pos-USA-354.0947-3811.75775045591
Cinnamyl alcohol
        Arabidopsis-HPLC-Pos-USA-194.0939-31550.4698068886
coniferaldehyde glucoside
        Arabidopsis-HPLC-Pos-USA-340.1151-26594.9902504875
Coniferin
        Arabidopsis-HPLC-Pos-USA-342.1311-2200
cyanidin 3-O-sophoroside
        Arabidopsis-HPLC-Pos-USA-610.1541-11100
D-tryptophan
        Arabidopsis-HPLC-Pos-USA-204.0896-857.377038430665
Esculin
        Arabidopsis-HPLC-Pos-USA-340.0791-19100
FAD
        Arabidopsis-HPLC-Pos-USA-785.1572-2039.7578313253
Glucoberteroin
        Arabidopsis-HPLC-Pos-USA-435.069-3911.45067187382
Glucobrassicin
        Arabidopsis-HPLC-Pos-USA-448.0619-1800
Glucohirsutin
        Arabidopsis-HPLC-Pos-USA-493.1126-3000
Glucoibarin
        Arabidopsis-HPLC-Pos-USA-479.0948-199.021889671361
Glucoraphanin
        Arabidopsis-HPLC-Pos-USA-437.0487-400
Homoeriodictyol
        Arabidopsis-HPLC-Pos-USA-362.0968-26606.2613260014
Indole-3-carboxylic acid beta-D-glucopyranosyl ester
        Arabidopsis-HPLC-Pos-USA-323.1002-10838.4397643186
indole-3-yl-acetyl-myo-inositol L-arabinoside
        Arabidopsis-HPLC-Pos-USA-469.158-5482.04566083599
kaempferol-3-O-rhamnopyranoside-7-O-rhamnopyranoside
        Arabidopsis-HPLC-Pos-USA-578.1646-16700
kaempferol-3-rhamnoside
        Arabidopsis-HPLC-Pos-USA-432.1055-25950.0005555617
luteolin 7-O-neohesperidoside
        Arabidopsis-HPLC-Pos-USA-594.1589-13500
OxIAA-Glc
        Arabidopsis-HPLC-Pos-USA-353.1114-11483.3333333333
pyropheophorbide a
        Arabidopsis-HPLC-Pos-USA-594.2795-34097.0384965815
Quercetin 3-O-[6''-O-rhamnosyl)glucoside] 7-O-rhamnoside
        Arabidopsis-HPLC-Pos-USA-756.2137-4400
salicylate 2-O-beta-D-glucoside
        Arabidopsis-HPLC-Pos-USA-300.0845-2605.45397025107
salidroside
        Arabidopsis-HPLC-Pos-USA-300.1208-1488.89139916766
scoparone
        Arabidopsis-HPLC-Pos-USA-206.0576-7100
Secologanin
        Arabidopsis-HPLC-Pos-USA-388.1376-2300
sn-1-lyso-2-16:0-monogalactosyldiacylglycerol
        Arabidopsis-HPLC-Pos-USA-538.3348-42898.6868075476
Syringin
        Arabidopsis-HPLC-Pos-USA-418.1471-3470.19572395511
umbelliferone
        Arabidopsis-HPLC-Pos-USA-208.0362-21336.3574382983
wogonin 7-O-beta-D-glucoside
        Arabidopsis-HPLC-Pos-USA-506.1429-17766.6703702058

Volcano Plot?

Sample 1:

Sample 2: