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Arabidopsis thaliana Species Overview

Experiment: Lipid extraction protocols (Lipid extraction protocols- Welti lab)

Sample Name ReplicatesDescription
Modified Bligh-Dyer5
Single-step5
Modified B-D plus Toledo-Markham5

1 Platforms

Platform: ESI-MS/MS [Welti lab]

+ Extraction metadata



+ Biological metadata
Metabolite Search

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Chemically defined metabolites in this experiment:

acDGDG(18:4-O/34:6)
        lipid0599  [M+NH4]+
acDGDG(18:4-O/34:7-O)
        lipid0600  [M+NH4]+
acDGDG(18:4-O/34:8-2O);acDGDG(18:4-O/36:6)
        lipid0601  [M+NH4]+
acDGDG(18:4-O/36:8-2O)
        lipid0603  [M+NH4]+
acMGDG(16:0/34:6)
        lipid0473  [M+NH4]+
acMGDG(16:0/34:7-O)
        lipid0474  [M+NH4]+
acMGDG(16:0/34:8-2O);acMGDG(16:0/36:6)
        lipid0476  [M+NH4]+
acMGDG(16:0/36:8-2O)
        lipid0483  [M+NH4]+
acMGDG(16:1/34:8-2O);acMGDG(16:1/36:6)
        lipid0468  [M+NH4]+
acMGDG(16:3-2O/34:6);acMGDG(18:1/34:6)
        lipid0519  [M+NH4]+
acMGDG(16:3-2O/34:8-2O);acMGDG(16:3-2O/36:6);acMGDG(18:1/34:8-2O);acMGDG(18:1/36:6)
        lipid0522  [M+NH4]+
acMGDG(16:3-2O/36:8-2O);acMGDG(18:1/36:8-2O)
        lipid0525  [M+NH4]+
acMGDG(16:3-O/34:8-2O);acMGDG(16:3-O/36:6)
        lipid0498  [M+NH4]+
acMGDG(16:3-O/36:8-2O)
        lipid0500  [M+NH4]+
acMGDG(16:3/34:6)
        lipid0448  [M+NH4]+
acMGDG(16:3/34:8-2O);acMGDG(16:3/36:6)
        lipid0454  [M+NH4]+
acMGDG(16:4-O/34:8-2O);acMGDG(16:4-O/36:6)
        lipid0489  [M+NH4]+
acMGDG(16:4-O/36:8-2O)
        lipid0495  [M+NH4]+
acMGDG(18:0/34:6)
        lipid0526  [M+NH4]+
acMGDG(18:0/34:8-2O);acMGDG(18:0/36:6)
        lipid0528  [M+NH4]+
acMGDG(18:2-3O/34:8-2O);acMGDG(18:2-3O/36:6)
        lipid0596  [M+NH4]+
acMGDG(18:2-O/34:8-2O);acMGDG(18:2-O/36:6)
        lipid0551  [M+NH4]+
acMGDG(18:2-O/36:8-2O)
        lipid0553  [M+NH4]+
acMGDG(18:2/34:6)
        lipid0514  [M+NH4]+
acMGDG(18:2/34:7-O)
        lipid0515  [M+NH4]+
acMGDG(18:2/34:8-2O)
        lipid0516  [M+NH4]+
acMGDG(18:2/36:8-2O)
        lipid0518  [M+NH4]+
acMGDG(18:3-2O/34:6)
        lipid0566  [M+NH4]+
acMGDG(18:3-2O/34:8-2O);acMGDG(18:3-2O/36:6)
        lipid0570  [M+NH4]+
acMGDG(18:3-2O/36:8-2O)
        lipid0580  [M+NH4]+
acMGDG(18:3-3O/34:6)
        lipid0591  [M+NH4]+
acMGDG(18:3-3O/34:7-O)
        lipid0592  [M+NH4]+
acMGDG(18:3-3O/36:8-2O)
        lipid0595  [M+NH4]+
acMGDG(18:3-O/34:6)
        lipid0542  [M+NH4]+
acMGDG(18:3-O/34:7-O)
        lipid0543  [M+NH4]+
acMGDG(18:3-O/34:8-2O);acMGDG(18:3-O/36:6)
        lipid0544  [M+NH4]+
acMGDG(18:3-O/36:6-O)
        lipid0546  [M+NH4]+
acMGDG(18:3-O/36:7-O)
        lipid0545  [M+NH4]+
acMGDG(18:3-O/36:8-2O)
        lipid0548  [M+NH4]+
acMGDG(18:3/34:6)
        lipid0501  [M+NH4]+
acMGDG(18:3/34:7-2O);acMGDG(18:3/36:5)
        lipid0506  [M+NH4]+
acMGDG(18:3/34:7-O)
        lipid0503  [M+NH4]+
acMGDG(18:3/34:8-2O);acMGDG(18:3/36:6)
        lipid0505  [M+NH4]+
acMGDG(18:3/36:7-O)
        lipid0508  [M+NH4]+
acMGDG(18:3/36:8-2O)
        lipid0512  [M+NH4]+
acMGDG(18:4-2O/34:6)
        lipid0559  [M+NH4]+
acMGDG(18:4-2O/34:7-O)
        lipid0560  [M+NH4]+
acMGDG(18:4-2O/34:8-2O);acMGDG(18:4-2O/36:6)
        lipid0561  [M+NH4]+
acMGDG(18:4-2O/36:8-2O)
        lipid0565  [M+NH4]+
acMGDG(18:4-3O/34:6)
        lipid0586  [M+NH4]+
acMGDG(18:4-3O/34:7-O)
        lipid0587  [M+NH4]+
acMGDG(18:4-3O/34:8-2O);acMGDG(18:4-3O/36:6)
        lipid0588  [M+NH4]+
acMGDG(18:4-O/34:6)
        lipid0532  [M+NH4]+
acMGDG(18:4-O/34:7-O)
        lipid0533  [M+NH4]+
acMGDG(18:4-O/34:8-2O);acMGDG(18:4-O/36:6)
        lipid0535  [M+NH4]+
acMGDG(18:4-O/36:6-2O)
        lipid0541  [M+NH4]+
acMGDG(18:4-O/36:6-O)
        lipid0538  [M+NH4]+
acMGDG(18:4-O/36:7-2O)
        lipid0575  [M+NH4]+
acMGDG(18:4-O/36:7-O)
        lipid0537  [M+NH4]+
acMGDG(18:4-O/36:8-2O)
        lipid0540  [M+NH4]+
acMGDG(18:4-O/36:8-2O)
        lipid0574  [M+NH4]+
acMGDG(18:5-2O/34:8-2O);acMGDG(18:5-2O/36:6)
        lipid0556  [M+NH4]+
acMGDG(18:5-2O/36:8-2O)
        lipid0558  [M+NH4]+
acPG(16:1/36:8-2O)
        lipid0293  [M-H]-
Campesterol-Glc
        lipid0248  [M+NH4]+
Campesterol-Glc(16:0)
        lipid0255  [M+NH4]+
Campesterol-Glc(18:2)
        lipid0261  [M+NH4]+
Campesterol-Glc(18:3)
        lipid0258  [M+NH4]+
Campesterol-Glc(18:4-O)
        lipid0816  [M+NH4]+
DAG(16:0/18:3)
        lipid0283  [M+NH4]+
DAG(18:2/18:3)
        lipid0285  [M+NH4]+
DAG(18:3/18:3)
        lipid0284  [M+NH4]+
DGDG(16:0/18:3-2O)
        lipid0395  [M+OAc]-
DGDG(16:0/18:3-O)
        lipid0632  [M+OAc]-
DGDG(16:0/18:4-O)
        lipid0392  [M+OAc]-
DGDG(18:3-2O/16:3)
        lipid0394  [M+OAc]-
DGDG(18:4-O/16:3)
        lipid0387  [M-H]-
DGDG(18:4-O/16:4-O)
        lipid0338  [M+OAc]-
DGDG(18:4-O/18:3)
        lipid0396  [M+OAc]-
DGDG(18:4-O/18:4-2O);DGDG(18:4-O/20:2)
        lipid0402  [M+OAc]-
DGDG(18:4-O/18:4-O)
        lipid0398  [M+OAc]-
DGDG(34:3)
        lipid0164  [M+NH4]+
DGDG(34:4)
        lipid0163  [M+NH4]+
DGDG(34:5)
        lipid0162  [M+NH4]+
DGDG(34:6)
        lipid0161  [M+NH4]+
DGDG(36:3)
        lipid0170  [M+NH4]+
DGDG(36:4)
        lipid0169  [M+NH4]+
DGDG(36:5)
        lipid0168  [M+NH4]+
DGDG(36:6)
        lipid0167  [M+NH4]+
DGDG(36:6-2O);DGDG(38:4)
        lipid0175  [M+NH4]+
DGDG(36:7-2O);DGDG(38:5)
        lipid0174  [M+NH4]+
DGDG(36:8-2O);DGDG(38:6)
        lipid0173  [M+NH4]+
DGMG(16:0)
        lipid0157  [M+NH4]+
DGMG(16:4-O)
        lipid0158  [M+NH4]+
DGMG(18:3)
        lipid0159  [M+NH4]+
DGMG(18:4-O)
        lipid0160  [M+NH4]+
GIPC(42:1)-3
        lipid0210  [M+NH4]+
GIPC(42:2)-3
        lipid0212  [M+NH4]+
GlcCer(34:1)-2
        lipid0226  [M+H]+
GlcCer(34:1)-3
        lipid0227  [M+H]+
GlcCer(40:1)-3
        lipid0233  [M+H]+
GlcCer(42:2)-3
        lipid0237  [M+H]+
LPC(16:0)
        lipid0025  [M+H]+
LPC(18:1)
        lipid0028  [M+H]+
LPC(18:2)
        lipid0027  [M+H]+
LPC(18:3)
        lipid0026  [M+H]+
LPE(16:0)
        lipid0052  [M+H]+
LPE(18:1)
        lipid0055  [M+H]+
LPE(18:2)
        lipid0054  [M+H]+
LPE(18:3)
        lipid0053  [M+H]+
MGDG(18:3-2O/16:3)
        lipid0370  [M+OAc]-
MGDG(18:3-2O/16:4-O)
        lipid0374  [M+OAc]-
MGDG(18:3-2O/16:4-O);MGDG(20:1/16:4-O)
        lipid0330  [M+OAc]-
MGDG(18:3-2O/18:3-O)
        lipid0383  [M+OAc]-
MGDG(18:3-O/16:4-O)
        lipid0625  [M+OAc]-
MGDG(18:3/16:4-O)
        lipid0323  [M+OAc]-
MGDG(18:4-2O/16:4-O);MGDG(20:2/16:4-O)
        lipid0329  [M+OAc]-
MGDG(18:4-O/16:3)
        lipid0358  [M-H]-
MGDG(18:4-O/16:3-O)
        lipid0362  [M-H]-
MGDG(18:4-O/16:4-O)
        lipid0325  [M+OAc]-
MGDG(18:4-O/16:4-O)
        lipid0361  [M-H]-
MGDG(18:4-O/18:1);MGDG(18:4-O/16:3-2O)
        lipid0366  [M-H]-
MGDG(18:4-O/18:2)
        lipid0373  [M+OAc]-
MGDG(18:4-O/18:3)
        lipid0372  [M+OAc]-
MGDG(18:4-O/18:3-2O);MGDG(18:4-O/20:3)
        lipid0382  [M+OAc]-
MGDG(18:4-O/18:3-3O)
        lipid0385  [M+OAc]-
MGDG(18:4-O/18:3-4O)
        lipid0386  [M+OAc]-
MGDG(18:4-O/18:3-O)
        lipid0376  [M+OAc]-
MGDG(18:4-O/18:4-2O)
        lipid0381  [M+OAc]-
MGDG(18:4-O/18:4-3O)
        lipid0384  [M+OAc]-
MGDG(18:4-O/18:4-O)
        lipid0375  [M+OAc]-
MGDG(18:5-2O/16:4-O);MGDG(20:3/16:4-O)
        lipid0328  [M+OAc]-
MGDG(18:5-2O/18:4-O);MGDG(20:3/18:4-O)
        lipid0380  [M+OAc]-
MGDG(30:6-O)
        lipid0138  [M+NH4]+
MGDG(34:3)
        lipid0143  [M+NH4]+
MGDG(34:4)
        lipid0142  [M+NH4]+
MGDG(34:5)
        lipid0141  [M+NH4]+
MGDG(34:6)
        lipid0140  [M+NH4]+
MGDG(35:3)
        lipid0808  [M+NH4]+
MGDG(36:3)
        lipid0149  [M+NH4]+
MGDG(36:4);MGDG(34:6-2O)
        lipid0148  [M+NH4]+
MGDG(36:5);MGDG(34:7-2O)
        lipid0147  [M+NH4]+
MGDG(36:6);MGDG(34:8-2O)
        lipid0146  [M+NH4]+
MGDG(36:6-2O);MGDG(38:4)
        lipid0154  [M+NH4]+
MGDG(36:7-2O);MGDG(38:5)
        lipid0153  [M+NH4]+
MGDG(36:8-2O);MGDG(38:6)
        lipid0152  [M+NH4]+
MGMG(16:0)
        lipid0133  [M+NH4]+
MGMG(16:3)
        lipid0132  [M+NH4]+
MGMG(18:3)
        lipid0135  [M+NH4]+
MGMG(18:4-O)
        lipid0136  [M+NH4]+
PA(34:1)
        lipid0126  [M+NH4]+
PA(34:2)
        lipid0125  [M+NH4]+
PA(34:3)
        lipid0124  [M+NH4]+
PA(34:4)
        lipid0123  [M+NH4]+
PA(34:6)
        lipid0121  [M+NH4]+
PA(36:2)
        lipid0131  [M+NH4]+
PA(36:3)
        lipid0130  [M+NH4]+
PA(36:4)
        lipid0129  [M+NH4]+
PA(36:5)
        lipid0128  [M+NH4]+
PA(36:6)
        lipid0127  [M+NH4]+
PC(16:0/18:3-2O)
        lipid0371  [M+OAc]-
PC(16:0/18:3-O)
        lipid0624  [M+OAc]-
PC(18:2/18:3-2O)
        lipid0379  [M+OAc]-
PC(18:2/18:3-O)
        lipid0628  [M+OAc]-
PC(18:3/18:3-2O)
        lipid0378  [M+OAc]-
PC(18:3/18:3-O)
        lipid0627  [M+OAc]-
PC(32:0)
        lipid0030  [M+H]+
PC(32:1)
        lipid0841  [M+H]+
PC(32:3)
        lipid0840  [M+H]+
PC(34:1)
        lipid0035  [M+H]+
PC(34:2)
        lipid0034  [M+H]+
PC(34:3)
        lipid0033  [M+H]+
PC(34:4)
        lipid0032  [M+H]+
PC(34:6)
        lipid0842  [M+H]+
PC(36:2)
        lipid0040  [M+H]+
PC(36:3)
        lipid0039  [M+H]+
PC(36:4)
        lipid0038  [M+H]+
PC(36:5)
        lipid0037  [M+H]+
PC(36:6)
        lipid0036  [M+H]+
PC(38:2)
        lipid0046  [M+H]+
PC(38:3)
        lipid0045  [M+H]+
PC(38:4)
        lipid0044  [M+H]+
PC(38:5)
        lipid0043  [M+H]+
PC(38:6)
        lipid0042  [M+H]+
PC(40:2)
        lipid0050  [M+H]+
PC(40:3)
        lipid0049  [M+H]+
PC(40:4)
        lipid0048  [M+H]+
PC(40:5)
        lipid0047  [M+H]+
PE(16:0/18:3-2O)
        lipid0355  [M-H]-
PE(16:0/18:3-3O)
        lipid0413  [M-H]-
PE(16:0/18:3-O)
        lipid0618  [M-H]-
PE(18:2/18:3-2O)
        lipid0360  [M-H]-
PE(18:2/18:3-3O)
        lipid0415  [M-H]-
PE(18:2/18:3-O)
        lipid0620  [M-H]-
PE(18:3/18:3-2O)
        lipid0359  [M-H]-
PE(18:3/18:3-3O)
        lipid0414  [M-H]-
PE(18:3/18:3-O)
        lipid0619  [M-H]-
PE(32:0)
        lipid0060  [M+H]+
PE(32:1)
        lipid0059  [M+H]+
PE(32:3)
        lipid0057  [M+H]+
PE(34:2)
        lipid0063  [M+H]+
PE(34:3)
        lipid0062  [M+H]+
PE(34:4)
        lipid0061  [M+H]+
PE(36:2)
        lipid0069  [M+H]+
PE(36:3)
        lipid0068  [M+H]+
PE(36:4)
        lipid0067  [M+H]+
PE(36:5)
        lipid0066  [M+H]+
PE(36:6)
        lipid0065  [M+H]+
PE(38:2)
        lipid0807  [M+H]+
PE(38:3)
        lipid0074  [M+H]+
PE(38:4)
        lipid0073  [M+H]+
PE(38:5)
        lipid0072  [M+H]+
PE(40:2)
        lipid0076  [M+H]+
PE(40:3)
        lipid0075  [M+H]+
PE(42:2)
        lipid0079  [M+H]+
PE(42:3)
        lipid0078  [M+H]+
PE(42:3)
        lipid1003  [M-H]-
PG(18:2/16:0-O)
        lipid0353  [M-H]-
PG(18:3-O/16:0)
        lipid0622  [M-H]-
PG(18:3-O/16:1)
        lipid0621  [M-H]-
PG(18:4-O/16:0)
        lipid0357  [M-H]-
PG(18:4-O/16:1)
        lipid0356  [M-H]-
PG(18:4-O/18:2)
        lipid0364  [M-H]-
PG(18:4-O/18:3)
        lipid0363  [M-H]-
PG(32:0)
        lipid0008  [M+NH4]+
PG(32:1)
        lipid0007  [M+NH4]+
PG(34:1)
        lipid0012  [M+NH4]+
PG(34:2)
        lipid0011  [M+NH4]+
PG(34:3)
        lipid0010  [M+NH4]+
PG(34:4)
        lipid0009  [M+NH4]+
PG(36:2)
        lipid0018  [M+NH4]+
PG(36:3)
        lipid0017  [M+NH4]+
PG(36:4)
        lipid0016  [M+NH4]+
PG(36:5)
        lipid0015  [M+NH4]+
PG(36:6)
        lipid0014  [M+NH4]+
PI(34:2)
        lipid0086  [M+NH4]+
PI(34:3)
        lipid0085  [M+NH4]+
PI(34:3)
        lipid1001  [M-H]-
PS(34:3)
        lipid0095  [M+H]+
PS(42:2)
        lipid0116  [M+H]+
PS(42:3)
        lipid0115  [M+H]+
Sitosterol(18:2)
        lipid0821  [M+NH4]+
Sitosterol(18:3)
        lipid0289  [M+NH4]+
Sitosterol-Glc
        lipid0250  [M+NH4]+
Sitosterol-Glc(16:0)
        lipid0257  [M+NH4]+
Sitosterol-Glc(18:2)
        lipid0263  [M+NH4]+
Sitosterol-Glc(18:3)
        lipid0260  [M+NH4]+
Sitosterol-Glc(18:4-O)
        lipid0818  [M+NH4]+
SQDG(32:0)
        lipid0182  [M-H]-
SQDG(34:3)
        lipid0186  [M-H]-
SQDG(36:6)
        lipid0189  [M-H]-
Stigmasterol-Glc
        lipid0249  [M+NH4]+
Stigmasterol-Glc(16:0)
        lipid0256  [M+NH4]+
Stigmasterol-Glc(18:2)
        lipid0262  [M+NH4]+
Stigmasterol-Glc(18:3)
        lipid0259  [M+NH4]+
Stigmasterol-Glc(18:4-O)
        lipid0817  [M+NH4]+
TAG(18:2/36:5)
        lipid0280  [M+NH4]+
TAG(18:3/34:2)
        lipid0276  [M+NH4]+
TAG(18:3/36:5)
        lipid0278  [M+NH4]+
TAG(18:3/36:6)
        lipid0277  [M+NH4]+
TeGDG(34:6)
        lipid0305  [M+NH4]+
TeGDG(36:6)
        lipid0309  [M+NH4]+
TrGDG(34:6)
        lipid0294  [M+NH4]+
TrGDG(36:6)
        lipid0298  [M+NH4]+
Total_acDGDG
Total_acMGDG
Total_acPG
Total_DAG
Total_DGDG
Total_DGMG
Total_GIPC
Total_GlcCer
Total_LPC
Total_LPE
Total_MGDG
Total_MGMG
Total_PA
Total_PC
Total_PE
Total_PG
Total_PI
Total_PS
Total_SQDG
Total_Sterol derivatives
Total_TAG
Total_TeGDG
Total_TrGDG

Volcano Plot?

Sample 1:

Sample 2: